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Microbiota of the Coffee Berry Borer (Hypothenemus hampei)
dataset
posted on 2024-06-11, 05:41 authored by University of Puerto Rico-Rio PiedrasThe goal of this study was to determine the microbiota of the most devastating coffee pest Hypothenemus hampei and its variations due to environmental conditions (sun vs. shade coffee) and physiological conditions (diet and stage of development). Bacterial communities of field-collected and laboratory-reared eggs and adult females were characterized using Illumina-based sequencing of the hypervariable region V4 of the 16S rDNA gene. Understanding the role of the microbiota in this economically important pest may assist in the development of novel management strategies based on the manipulation of its symbionts.
Funding
U.S. Department of Agriculture, 58-1245-4-083
U.S. Department of Agriculture, 8272-0685-CA
History
Data contact name
BioProject Curation StaffData contact email
bioprojecthelp@ncbi.nlm.nih.govPublisher
National Center for Biotechnology InformationTemporal Extent Start Date
2017-03-07Theme
- Non-geospatial
ISO Topic Category
- biota
National Agricultural Library Thesaurus terms
sequence analysisPending citation
- No
Public Access Level
- Public