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Microbiomes of ten diverse soil protists

dataset
posted on 2024-09-29, 07:17 authored by The Connecticut Agricultural Experiment Station
Rhizosphere protists play a critical role in shaping the microbiome, and understanding their interactions with their associated bacteria may play roles in plant health. This study investigates the bacterial communities of ten maize rhizosphere protists, revealing distinct bacterial assemblages for each. Over half the identified bacteria via metagenomic or culture methods represent novel species. Genomic analyses revealed enrichment for genes associated with functions potentially beneficial to plant growth, including phytohormone production, phosphate solubilization, and antibiosis. This study demonstrates a high degree of bacterial diversity associated with rhizosphere protists, which could be beneficial for plants.

Funding

USDA-NIFA: 2022-67013-37144

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-03-22

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA1090919

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1090919 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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