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Microbial community analysis of bacteria recovered from Romaine lettuce leaves and aggregative swabs of Romaine leaves.

dataset
posted on 2024-11-23, 22:17 authored by University of Illinois at Urbana-Champaign
The goal of this project was to compare the bacterial communities recovered from Romaine lettuce leaves and aggregative swabs of Romaine leaves to see if there is potential to use aggregative swabs for food safety testing. The potential advantage of collecting aggregative swabs over Romaine tissue samples is that the swabs can be collected nondestructively and can come in contact with more Romaine plants and therefore be potentially more representative of the Romaine field. A sample that is more representative of the field could in theory potentially have a better change at recovering microorganisms relevant to food safety. Analysis was done to compare the Romaine tissue and the aggregative swab samples' performance in recovering quality and food safety bacterial indicators.

Funding

USDA-NIFA: 2021-67017-33828

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-04-07

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA824469

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA824469 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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