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Melanaphis sacchari Genome sequencing and assembly

dataset
posted on 2024-01-26, 22:58 authored by USDA-ARS
The goal of the study was to develop microsatellite markers for sugarcane aphid and endosymbiont detection. There is uncertainty if there are multiple biotypes in the U.S. or if all aphids are one biotype. Genotyping with 52 microsatellite markers indicated that the samples were all one biotype with the exception of a single sample collected from Sinton, TX which had the predominant biotype as well as another biotype. Genotyping of the aphid samples with 12 microsatellite markers from Buchera aphidicola, the obligate aphid symbiont, had nearly identical results. Thus the invasive sugarcane aphid is spreading in the U.S. as primarily one asexual clone.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2016-03-28

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA316592

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