Ag Data Commons
Browse

File(s) stored somewhere else

Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.

Malvidin modulated gut microbial dysbiosis in a murine colitis model induced by dextran sulfate sodium

dataset
posted on 2024-06-11, 06:03 authored by USDA
The effect of MV on the structure and function of the colon microbiome was evaluated using 16S rRNA gene sequencing and a Random-Matrix Theory based network algorithm. DSS had a profound effect on the gut microbiome and significantly repressed both microbial richness and evenness, MV further reduced evenness but promoted microbial interactions and restored the Firmicutes to Bacteroidetes ratio repressed by DSS. Moreover, MV reduced the incident of pathogenic bacteria, such as Ruminococcus gnavus, in colitis mice.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-04-24

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA534501

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA534501 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC