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Macrophomina phaseolina isolate:strawberry Genome sequencing and assembly

dataset
posted on 2024-09-29, 05:44 authored by USDA
This is an assembly for an isolate of the fungus Macrophomina phaseolina that was recovered from strawberry. M. phaseolina causes charcoal rot in strawberry which results in crown discoloration and eventual plant death, thus resulting in a decreased yield in infested fields. This isolate from strawberry, along with an isolate recovered from alfalfa were sequenced and the genomes were compared, along with other draft genomes of M. phaseolina from other species, to identify genes that are unique to M. phaseolina isolates that show host specificity toward strawberry. This genome is the most complete M. phaseolina genome to date and is also intended to be a resource for future studies.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-09-30

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA428521

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA428521 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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