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Lignin-based resistance to Cuscuta campestris in tomato

dataset
posted on 2024-06-11, 06:13 authored by University of California, Davis
Parasitic angiosperms use specialized organs known as haustoria as physiological bridges to extract nutrients and water from their hosts. Cuscuta species (dodders) are common and agriculturally destructive parasitic plants. While most tomato cultivars can be parasitized by C. campestris, the Heinz hybrid cultivars 9492 and 9553 (H9492 and H9553) have been reported to exhibit resistance to dodders. However, another related Heinz hybrid cultivar 9775 (H9775) is susceptible. To identify the key resistance genes, we used RNA-Seq and DNA-Seq to identify the important regulators in resistant cultivars.

Funding

U.S. Department of Agriculture, USDA-NIFA 2013-02345

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-06-23

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA550259

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA550259 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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