Ladona fulva manual annotations on genome assembly Lful_1.0
This dataset presents manual annotations of Ladona fulva genome annotations v0.5.3 and genome assembly v1.0. Manual annotations were performed by individual annotators in the Apollo software at the i5k Workspace@NAL, and QC'd via the GFF3toolkit software, NCBI's table2asn_GFF software (https://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program/table2asn_GFF/), and manual inspection. Manual annotations are presented here on the original coordinate system of genome assembly v1.0.
Resources in this dataset:
Resource Title: Ladona fulva manual annotations on genome assembly Lful_1.0.
File Name: ladful_manual_annotations.tar.gz
Resource Description: This directory contains the following files: - ladful_manual_annotations_cds.fa: CDS sequences of the Ladona fulva manual annotations. - ladful_manual_annotations.gff: GFF3 file of the Ladona fulva manual annotations. - ladful_manual_annotations_pep.fa: Protein sequences of the Ladona fulva manual annotations. - ladful_manual_annotations_trans.fa: RNA sequences of the Ladona fulva manual annotations.
Funding
National Human Genome Research Institute: U54 HG003273
History
Data contact name
Poelchau, MonicaData contact email
monica.poelchau@usda.govPublisher
Ag Data CommonsTemporal Extent Start Date
2011-05-07Theme
- Not specified
Geographic Coverage
{"type":"FeatureCollection","features":[{"geometry":{"type":"Point","coordinates":[49.66667,7.5]},"type":"Feature","properties":{}}]}Geographic location - description
Rheinland-Pfalz, GermanyISO Topic Category
- biota
Ag Data Commons Group
- Insects - i5K
National Agricultural Library Thesaurus terms
genomics; Ephemera danica; genome assembly; genomePending citation
- No
Public Access Level
- Public
