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Isolates of Pseudomonas syringae phylogroup 2 and Pseudomonas viridiflava phylogroup 7 Genome sequencing and assembly

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posted on 2024-06-11, 06:40 authored by USDA

These Pseudomonas syringae phylogroup 2 and Pseudomonas viridiflava phylogroup 7 strains were isolated from bacterial stem blight-diseased alfalfa (Medicago sativa) plants from the Western and Midwestern United States. These sequences can be used to investigate virulence genes contributing to bacterial stem blight, and for comparison to other Pseudomonas syringae and Pseudomonas viridiflava strains isolated from other hosts.

Funding

U.S. Department of Agriculture, 2017-70005-27088

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-05-07

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA728054

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA728054 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

genome sequencing and assembly raw sequence reads

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