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Impact of Trichoderma application on tomato rhizosphere bacterial community

dataset
posted on 2025-03-07, 02:30 authored by Pennsylvania State University
Trichoderma species are commonly used to control soilborne pathogens of various crops. However, their biocontrol efficacy often varies. Although many factors (and their interactions) can influence their biocontrol efficacy, soil bacterial community could play a major role (ex: antagonists and synergists). Further, the impact of Trichoderma on the soil bacterial community is not well known. The objectives of the current study were to (i) identify tomato rhizosphere bacterial taxa that could either positively or negatively interact with Trichoderma virens (Tv) and T. harzianum (Th), particularly when they applied to soil individually and in combination (Tv + Th = Tvh), (ii) determine whether the application of Tv, Th, and Tvh differentially alters the tomato rhizosphere bacterial community structure (ex: beta and alpha diversity, the relative abundance of major bacterial phyla and genera), and (iii) investigate if Tv, Th, and Tvh positively/negatively affect the abundance of potentially harmful (ex: phytopathogens, denitrifiers) and beneficial (ex: symbiotic/free-living nitrogen fixers, nitrifiers, biocontrol agents, plant growth promoters) bacterial genera in the tomato rhizosphere.

Funding

USDA: AM170200XXXXG006

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2023-08-21

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA1007684

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1007684 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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