Immigration and cyclical bottlenecks: High inbreeding despite high genetic diversity in an oscillating population of the biting midge, Culicoides sonorensis (Diptera: Ceratopogonidae)
These data represent the microsatellite peak calls generated after genotyping the specimens, as well as, the outputs from downstream analyses and the metadata used to construct some of the figures and tables. The microsatellite data can be found in "Shults_2023_peak_calls.xlsx" and contains the identity of each peak scored scored using Geneious v.9.1 software. An "x" represents no peak call at that marker for that individual. These data were used as input for all of the subsequent population genetic analyses. All of the data used to create the tables and figures of the manuscript can be found in "Shults_2023_tables_figs.xlsx".
Resources in this dataset:
-
Resource Title: Microsatellite peak calls File Name: Shults_2023_peak_calls.xlsx Resource Description: Contained in this file are all of the individual specimens (rows) genotype during this project. An "x" represents an uncalled peak for that specific marker.
-
Resource Title: Tables and Figures File Name: Shults_2023_tables_figs.xlsx Resource Description: Contained in this file are all of the metadata used to create the tales and figures from the manuscript. Each tab is labeled with the corresponding information and IBT stands for isolation by time.
Funding
Agricultural Research Service, Non-Assistance Cooperative Agreement: 58-3020-9-007
History
Data contact name
Shults, PhillipData contact email
phillip.shults@usda.govPublisher
Ag Data CommonsTemporal Extent Start Date
2018-04-23Temporal Extent End Date
2021-03-22Theme
- Not specified
Geographic Coverage
{"type":"FeatureCollection","features":[{"geometry":{"type":"Polygon","coordinates":[[[-117.7473449707,33.861114931205],[-117.7473449707,34.182092230007],[-117.05795288086,34.182092230007],[-117.05795288086,33.861114931205],[-117.7473449707,33.861114931205]]]},"type":"Feature","properties":{}}]}ISO Topic Category
- environment
National Agricultural Library Thesaurus terms
immigration; inbreeding; genetic variation; Culicoides sonorensis; microsatellite repeats; genotyping; genetic analysis; population geneticsOMB Bureau Code
- 005:18 - Agricultural Research Service
OMB Program Code
- 005:040 - National Research
ARS National Program Number
- 104
Pending citation
- No
Public Access Level
- Public