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Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout

dataset
posted on 2024-06-11, 07:10 authored by USDA/ARS
Bacterial cold water disease (BCWD) is one of the frequent causes of elevated mortality in salmonid aquaculture. Previously, we identified and validated microsatellites on chromosome Omy19 associated with QTL (quantitative trait loci) for BCWD resistance and spleen size in rainbow trout. The objective of this study was to identify single nucleotide polymorphism (SNP) markers associated with BCWD resistance and spleen size using both genome-wide association studies (GWAS) and QTL mapping approaches.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2015-08-06

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA292117

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA292117 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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    Categories

    Keywords

    Oncorhynchus mykisseEukaryotesraw sequence reads

    Licence

    Copyright Undetermined

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