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Identification of ruminal starch utilizing bacterial strain

Name: Identification of ruminal starch utilizing bacterial strain
Published: 2024-06-11T06:33:03+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 06:33 authored by South Dakota State University

A batch culture approach was used to identify starch utilizing bacteria from the rumen of beef cows. Samples were collected and analyzed from the rumen fluid donors and in cultures that were either supplemented with starch or not (control). 16S rRNA profiling was used to monitor changes in bacterial composition. A metagenomics/shot gun approach was used to annotate the genome of an enriched bacterial strain.

Funding

United States Dept of Agriculture, SD00H551-15

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-11-07

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA675290

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA675290 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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