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Identification of R2R3-MYB Transcription Factors Involved in Anthocyanin Biosynthesis Regulation in Cornus florida and C. kousa

Name: Identification of R2R3-MYB Transcription Factors Involved in Anthocyanin Biosynthesis Regulation in Cornus florida and C. kousa
Published: 2024-06-11T06:56:35+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 06:56 authored by University of Tennessee Knoxville

Mature bracts were collected from three cultivars of C. florida and two cultivars of C. kousa to study regulatory and structural genes involved in phenylpropanoid metabolism by RNA-Seq approach. Total RNA was extracted using 500 mg of frozen tissue per sample, using the GeneAll Ribospin Plant Total RNA Kit (GeneAll Biotechnology, Seoul, Korea), following the manufacturer's instructions. Illumina HiSeq 2500 generated 150 bp paired-end reads (GeneWiz, South Plainfield, NJ, USA) are being reported. Read quality control was performed using FastQC v0.11.4. Adaptors, short (

Funding

United States Department of Agriculture, NACA 58-6062-006

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-09-02

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA876317

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA876317 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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