Hyalella azteca Genome Assembly 1.0
The Baylor College of Medicine recently sequenced and annotated the Hyalella azteca genome as part of the i5k pilot project. The Hyalella azteca research community has manually reviewed and curated the computational gene predictions and generated an official gene set, OGSv1.0. This dataset presents the Hyalella azteca genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource. The corresponding genome assembly in NCBI is GCA_000764305.1.
Resources in this dataset:
Resource Title: Hyalella azteca genome assembly v1.0 fasta and agp files for contigs and scaffolds.
File Name: Hazt_BCM_assembly_v1-0.tar.gz
Resource Description:
The attached tar.gz archive (Hazt_BCM_assembly_v1-0.tgz ) contains the following files:
Hazt.contigs. This file contains the sequence information of the contigs of the Hyalella azteca 1.0 assembly.
Hazt.scaffolds. This file contains the sequence information of the scaffolds of the Hyalella azteca 1.0 assembly.
Hazt.agp. This file contains information linking the contigs and scaffolds for this assembly. A description of the agp format is available here: http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specificati....
Funding
National Human Genome Research Institute: U54 HG003273
History
Data contact name
Poynton, HelenData contact email
Helen.Poynton@umb.eduPublisher
Ag Data CommonsTheme
- Not specified
ISO Topic Category
- biota
- environment
- oceans
Ag Data Commons Group
- Insects - i5K
National Agricultural Library Thesaurus terms
genome assembly; nucleotide sequences; sequence analysisPending citation
- No
Public Access Level
- Public