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Hazt_BCM_assembly_v1-0.tar.gz (363.53 MB)

Hyalella azteca Genome Assembly 1.0

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posted on 2024-02-16, 15:31 authored by Helen Poynton, Richard A. Gibbs, Kim C. Worley, Shwetha C. Murali, Sandra L. Lee, Donna M. Muzny, Daniel S.T. Hughes, Hsu Chao, Huyen Dinh, Harshavardhan Doddapaneni, Jiaxin Qu, Shannon Dugan-Perez, Yi Han, Stephen Richards

The Baylor College of Medicine recently sequenced and annotated the Hyalella azteca genome as part of the i5k pilot project. The Hyalella azteca research community has manually reviewed and curated the computational gene predictions and generated an official gene set, OGSv1.0. This dataset presents the Hyalella azteca genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource. The corresponding genome assembly in NCBI is GCA_000764305.1.

Resources in this dataset:

  • Resource Title: Hyalella azteca genome assembly v1.0 fasta and agp files for contigs and scaffolds.

    File Name: Hazt_BCM_assembly_v1-0.tar.gz

    Resource Description:

    The attached tar.gz archive (Hazt_BCM_assembly_v1-0.tgz ) contains the following files:

    Hazt.contigs. This file contains the sequence information of the contigs of the Hyalella azteca 1.0 assembly.

    Hazt.scaffolds. This file contains the sequence information of the scaffolds of the Hyalella azteca 1.0 assembly.

    Hazt.agp. This file contains information linking the contigs and scaffolds for this assembly. A description of the agp format is available here:


National Human Genome Research Institute: U54 HG003273


Data contact name

Poynton, Helen

Data contact email


Ag Data Commons


  • Not specified

ISO Topic Category

  • biota
  • environment
  • oceans

Ag Data Commons Group

  • Insects - i5K

National Agricultural Library Thesaurus terms

genome assembly; nucleotide sequences; sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Poynton, Helen; Gibbs, Richard A.; Worley, Kim C.; Murali, Shwetha C.; Lee, Sandra L.; Muzny, Donna M.; Hughes, Daniel S.T.; Chao, Hsu; Dinh, Huyen; Doddapaneni, Harshavardhan; Qu, Jiaxin; Dugan-Perez, Shannon; Han, Yi; Richards, Stephen (2018). Hyalella azteca Genome Assembly 1.0. Ag Data Commons.

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