Hyalella azteca Genome Annotations v0.5.3
The Baylor College of Medicine recently sequenced and annotated the Hyalella azteca genome as part of the i5k pilot project.
This dataset presents the Hyalella azteca gene set BCM_v_0.5.3, which was generated computationally. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Hyalella azteca genome assembly 1.0. Further annotation method details will be available in a forthcoming publication.
NOTE: This gene set is an unstable pre-release (v0.5.3), and was provided to facilitate manual curation and analyses before the official gene set is released. Gene identifiers from this gene set will likely not be maintained.
If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use
Resources in this dataset:
Resource Title: Hyalella azteca genome annotations v0.5.3 for genome assembly Hyalella azteca v1.0 .
File Name: hyaazt_BCM_version_0.5.3.tar.gz
Resource Description: The attached tar.gz archive (hyaazt_BCM_version_0.5.3.tar.gz) contains the following files: HAZT.CDS.fna. CDS sequences of Hyalella azteca genome annotations v0.5.3. HAZT.faa. Amino acid sequences of Hyalella azteca genome annotations v0.5.3. HAZT.fna. cDNA sequences of Hyalella azteca genome annotations v0.5.3. HAZT.Models.gff3. Gff3 of all gene predictions of Hyalella azteca genome annotations v0.5.3. HAZT.Analysis.gff3 Gff3 of all evidence contributing to Hyalella azteca genome annotations v0.5.3.
National Human Genome Research Institute, U54 HG003273
Data contact namePoynton, Helen
Data contact emailHelen.Poynton@umb.edu
PublisherAg Data Commons
- Not specified
ISO Topic Category
Ag Data Commons Group
- Insects - i5K
National Agricultural Library Thesaurus termsgenome assembly; nucleotide sequences; sequence analysis
Public Access Level