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Helicoverpa zea Raw sequence reads

dataset

posted on 2024-06-11, 06:18 authored by University of Maryland

The goals of the study were to identify regions of the H. zea genome that are under selection following Cry1Ac exposure when it was overlayed on larval diet for two laboratory-reared strains. These strains (GA-R and GA) were described in Brevault et al. 2013, and differ in their susceptibility to Cry toxins. GA-R is relatively more resistant to Cry1Ac than is GA. We then characterized the haplotypes and their frequencies for one of the most divergent regions using cDNA sequencing by PacBio in each laboratory strain.

Funding

U.S. Department of Agriculture, 2016-33522-25640

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-01-08

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA599999

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA599999 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Helicoverpa zea eEukaryotes raw sequence reads

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