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halhal_BCM_version_0.5.3.tar.gz (197.69 MB)

Halyomorpha halys genome annotations v0.5.3

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posted on 2024-02-15, 17:23 authored by Dawn E. Gundersen-Rindal, Daniel S.T. Hughes, Stephen Richards

This dataset presents the Halyomorpha halys gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Halyomorpha halys genome assembly 1.0. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use


Resources in this dataset:

  • Resource Title: Halyomorpha halys genome annotations v0.5.3.

    File Name: halhal_BCM_version_0.5.3.tar.gz

    Resource Description: The attached tar.gz archive (halhal_BCM_version_0.5.3.tar.gz) contains the following files:

    HHAL.CDS.fna. CDS sequences of the genome annotations v0.5.3.

    HHAL.faa. Amino acid sequences of the genome annotations v0.5.3.

    HHAL.fna. cDNA sequences of the genome annotations v0.5.3.

    HHAL.Models.gff3. Gff3 of all gene predictions of the genome annotations v0.5.3.

    HHAL.Analysis.gff3 Gff3 of all evidence contributing to the genome annotations v0.5.3.

Funding

National Human Genome Research Institute: U54 HG003273

History

Data contact name

Sparks, Michael

Data contact email

Michael.Sparks@ARS.USDA.GOV

Publisher

Ag Data Commons

Theme

  • Not specified

ISO Topic Category

  • biota

Ag Data Commons Group

  • Insects - i5K

National Agricultural Library Thesaurus terms

genomics

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Gundersen-Rindal, Dawn E.; Hughes, Daniel S.T.; Richards, Stephen (2019). Halyomorpha halys genome annotations v0.5.3. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1503817

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