Guanica Dry Forest Soil Metagenome Raw sequence reads

dataset

posted on 2024-11-23, 22:01 authored by University of Puerto Rico at Mayaguez

To describe the taxonomic diversity and functional profiles of Guanica dry forest, metagenomic DNA was extracted from a metagenomic library generated from forest soil. The DNA was shotgun-sequenced using Illumina and analyzed using the MG-RAST server. The profiles can be used in comparative studies involving soils from high temperature and low humidity environments. Additionally, the functional profile can be used for bioprospecting studies with applications in biomedical sciences, biotechnology and microbial, population and applied ecology fields.

Funding

USDA: USDA-CSREES: 2007- 02386

NIGMS NIH HHS: R25 GM127191

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-11-02

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA587232

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA587232 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

soil metagenome eOther raw sequence reads metagenome

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