Gossypium hirsutum Root Transcriptome or Gene expression

dataset

posted on 2024-11-23, 21:41 authored by Auburn university

This study is intended to define the root transcriptome of upland cotton, and compare gene expression of susceptible (DPL90 & SG747), hypersensitive (LONREN 1), and resistant (BARBAREN 713) varieties of cotton during infestation by reniform nematode (Rotylenchulus reniformis). R. reniformis is a significant root endoparasitic nematode pathogen of cotton for which there are limited genetic resources. This study attempts to identify the critical genes for resistance within the limited available resources.

Funding

USDA / AAES: ALA021-1-10008

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2015-02-10

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

Public Access Level

Public

Accession Number

PRJNA275155

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA275155 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Gossypium hirsutum eEukaryotes transcriptome

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