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Gossypium barbadense isolate:P1-P3 | cultivar:Pimas Raw sequence reads

dataset

posted on 2024-09-29, 05:23 authored by USDA-ARS, Center for Biotechnology and Genomics, Texas Tech Univ., Lubbock, TX

As an initial step to explore the transcriptome genetic diversity and to discover single nucleotide polymorphic (SNP)-biomarkers for marker assisted breeding within Pima (Gossypium barbadense L.) cotton, leaves from 25 day plants of three diverse genotypes were used to develop cDNA libraries. Annotated contigs or transcripts revealed genes of major metabolic pathways that might explain the gene pool diversity of these Pima genotypes.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2015-07-21

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA290525

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA290525 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Gossypium barbadense eEukaryotes raw sequence reads

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