Genomes To Fields (G2F) Inbred Ear Imaging Data 2017
A subset of ~30 inbreds were evaluated in 2014 and 2015 to develop an image based ear phenotyping tool. The data is stored in CyVerse.
Data types in this directory tree are: dimension and width profile data collected from scanned images of ears, cobs, and kernels collected from the Genomes To Fields (G2F) project cooperators. G2F is an umbrella initiative to support translation of maize (Zea mays) genomic information for the benefit of growers, consumers and society. This public-private partnership is building on publicly funded corn genome sequencing projects to develop approaches to understand the functions of corn genes and specific alleles across environments. Ultimately this information will be used to enable accurate prediction of the phenotypes of corn plants in diverse environments. There are many dimensions to the over-arching goal of understanding genotype-by-environment (GxE) interactions, including which genes impact which traits and trait components, how genes interact among themselves (GxG), the relevance of specific genes under different growing conditions, and how these genes influence plant growth during various stages of development.
Resources in this dataset:
Resource Title: CyVerse Genomes To Fields Inbred Ear Imaging 2017 dataset download.
File Name: Web Page, url: http://datacommons.cyverse.org/browse/iplant/home/shared/commons_repo/curated/Edgar_Spalding_G2F_Inbred_Ear_Imaging_June_2017
Dataset (csv, tar.gz) and metadata (BibTex/Endnote) downloads. See _readme.txt for file contents.
Funding
National Science Foundation
University of Wisconsin-Madison
USDA-NIFA
History
Data contact name
Spalding, EdgarData contact email
spalding@wisc.eduPublisher
CyVerse Data CommonsIntended use
To support translation of maize genomic information for the benefit of growers, consumers and society.Theme
- Not specified
ISO Topic Category
- biota
- farming
National Agricultural Library Thesaurus terms
genes; corn; gene ontology; plant genetic resources; Zea mays; image analysis; genomics; growers; society; public-private partnerships; sequence analysis; alleles; prediction; genotype-environment interaction; plant growth; developmental stages; corn ears; corn cobs; sweetcorn; seeds; botany; information storage; data collection; phenotypeOMB Bureau Code
- 005:18 - Agricultural Research Service
OMB Program Code
- 005:040 - National Research
ARS National Program Number
- 301
Pending citation
- No
Public Access Level
- Public