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Genome wide expression analysis of genes regulated by SGE1 in Fusarium verticillioides

dataset
posted on 2024-06-11, 05:17 authored by Bacterial Foodborn Pathogens and Mycology Research, USDA-ARS
Investigation of whole genome expression changes induced by SGE1 30 minutes after induction of SGE1 expression in an SGE1 mutant strain of Fusarium verticillioides. Comparison between wild-type, SGE1 overexpression mutant GMTcp-272 (xlnp:SGE1 in SGE1 mutant background) and sge1 mutant in liquid medium (18 hrs) after induction with xylose. SGE1 plays a role in pathogenicity and synthesis of secondary metabolism. Overall design: In this study, total RNA recovered from nine cultures of F. verticillioides (wild-type, sge1 mutant and SGE1 overexpression mutant GMTcp-272, in triplicate) 30 minutes after the addition of xylose was used to identify genes regulated by SGE1.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2014-04-09

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA244255

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA244255 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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