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Genome sequencing of Clostridium difficile isolated from pork samples in Connecticut

dataset
posted on 2024-09-29, 05:16 authored by UNIVERSITY OF CONNECTICUT
This study is a part of a USDA-AFRI-funded multi-institutional project investigating the potential for food-borne transmission of C. difficile. We isolated a multi-drug resistant C. difficile from pork samples in Connecticut. The whole genome sequencing of this isolate can provide valuable information regarding its antibiotic resistance and virulence profiles, and similarities with clinical C. difficile isolates.

Funding

USDA: 2010-03567

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2014-04-16

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA238404

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA238404 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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