Genome analysis of the esca-associated Basidiomycetes Fomitiporia mediterranea, Fomitiporia polymorpha, Inonotus vitis, and Tropicoporus texanus reveal virulence factor repertoires characteristic of white-rot fungi

Name: Genome analysis of the esca-associated Basidiomycetes Fomitiporia mediterranea, Fomitiporia polymorpha, Inonotus vitis, and Tropicoporus texanus reveal virulence factor repertoires characteristic of white-rot fungi
Published: 2024-11-23T21:30:11+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-11-23, 21:30 authored by University of California Davis

The aim of this project is to assemble the genomes of 4 Basidiomycetes species associated with Esca and perform a comparative analysis, focusing on putative virulence factors in these newly sequenced genomes against those found in known species causing brown-rot, white-rot, and other ascomycetes plant pathogens.

Funding

USDA: 2012-51181-19954

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-04-11

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA1099290

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1099290 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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