Genetic fingerprinting of 184 Aspergillus from Ethiopia isolated in 2015 from peanut seeds, raw data
Genetic fingerprinting of 184 Aspergillus section Flavi isolates from Ethiopia screened with 24 Insertion/Deletion markers located within the aflatoxin-biosynthesis gene cluster. Each file name contains in this order: isolate number, marker number, range of base pairs on the aflatoxin-biosynthesis cluster where the marker is located, and well position within the 384 microplate used for capillary electrophoresis.
Resources in this dataset:
Resource Title: AFLC01.
File Name: 01AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC01.
Resource Title: AFLC02.
File Name: 02AFC.zip
Resource Description: Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC02
Resource Title: AFLC03.
File Name: 03AFC.zip
Resource Description: Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC03
Resource Title: AFLC04.
File Name: 04AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC04
Resource Title: AFLC05.
File Name: 05AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC05
Resource Title: AFLC06.
File Name: 06AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC06
Resource Title: AFLC07.
File Name: 07AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC07
Resource Title: AFLC08.
File Name: 08AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC08
Resource Title: AFLC09.
File Name: 09AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC09
Resource Title: AFLC10.
File Name: 10AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC10
Resource Title: AFLC11.
File Name: 11AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC11
Resource Title: AFLC12.
File Name: 12AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC12
Resource Title: AFLC13.
File Name: 13AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC13
Resource Title: AFLC14.
File Name: 14AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC14
Resource Title: AFLC15.
File Name: 15AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC15
Resource Title: AFLC16.
File Name: 16AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC16
Resource Title: AFLC17.
File Name: 17AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC17
Resource Title: AFLC18.
File Name: 18AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC18
Resource Title: AFLC19.
File Name: 19AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC19
Resource Title: AFLC20.
File Name: 20AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC20
Resource Title: AFLC21.
File Name: 21AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC21
Resource Title: AFLC22.
File Name: 22AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC22
Resource Title: AFLC23.
File Name: 23AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC23
Resource Title: AFLC24.
File Name: 24AFC.zip
Resource Description: Genetic fingerprinting of 184 Aspergillus isolates from Ethiopia screened with Insertion/Deletion marker AFLC24
Funding
USDA-ARS: 6604-21000-003-00D
History
Data contact name
Renee AriasData contact email
Renee.Arias@USDA.GOVPublisher
Ag Data CommonsIntended use
These are the raw data of genetic fingerprinting 184 Isolates of the fungi Aspergillus flavus and Aspergillus parasiticus that were found colonizing peanut seeds in the Oromiya region of Ethiopia. The complete analysis of the data will be submitted as a manuscript to the scientific journal BMC Microbiology. Making the raw data available to the public is a requirement of that journal, and makes it feasible for any reader who wishes to re-analyze them, to have access to the original source of information.Use limitations
The data can be used in the future to compare them with newly collected isolates of these fungi; and thus, detect possible changes in population genetics that result from the use of pesticides, or biological control in those environments. Data are in .FSA format, were generated with Applied Biosystems DNA Analyzer 3730, and can be easily processed using the software GeneMapper v. 4.1 or higher.Temporal Extent Start Date
2015-07-02Theme
- Not specified
Geographic Coverage
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Oromiya, EthiopiaISO Topic Category
- biota
- farming
National Agricultural Library Thesaurus terms
DNA fingerprinting; Aspergillus; Ethiopia; peanuts; seeds; multigene family; capillary electrophoresis; genetic markers; aflatoxinsOMB Bureau Code
- 005:18 - Agricultural Research Service
OMB Program Code
- 005:040 - National Research
ARS National Program Number
- 301
Primary article PubAg Handle
Pending citation
- No
Public Access Level
- Public