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Fusarium verticillioides MAT1-2 strain near isogenic to the sequenced FGSC7600

dataset
posted on 2024-09-29, 07:18 authored by USDA-ARS
The study goal was to create a Fusarium verticillioides MAT1-2 strain that was near isogenic to the sequenced FGSC 7600 (NRRL 20955). We accomplished this by using the sexual cycle of the fungus to cross FGSC 7600, carrying the MAT1-1 locus, with FGSC7603 (NRRL 20956), carrying the MAT1-2 locus. Progeny with the MAT1-2 locus were sequentially backcrossed with FGSC 7600 six times. We sequenced each generation with a MiSeq platform and then mapped recombination events. The final MAT1-2 strain is approximately 93% identical to FGSC7600 and is available from the Fungal Genetics Stock Center (FGSC 27326) and from the USDA ARS Culture Collection as NRRL 64809.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-07-09

Theme

  • Non-geospatial

ISO Topic Category

  • biota

Ag Data Commons Group

  • ARS Culture Collection

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA1133776

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1133776 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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