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Fungal communities associated with acorn woodpeckers and their excavations

dataset
posted on 2024-11-23, 22:15 authored by USDA Forest Service, Northern Research Station
Wood-decay fungi soften wood, putatively providing opportunities for woodpeckers to excavate an otherwise hard substrate, yet the fungal community composition in tree cavities and the specificity of these relationships is largely unknown. We used high-throughput amplicon sequencing of the fungal ITS2 region to examine the fungal communities associated with acorn woodpeckers (Melanerpes formicivorus) and their cavities in mature valley oak (Quercus lobata) and blue oak (Q. douglasii) trees in an oak savannah of coastal California, USA. Acorn woodpeckers and their excavations harbored over 1400 fungal taxa, including more than 100 putative wood-decay fungi. Moreover, the fungal communities found on the birds were more similar to those found in excavated cavities than those found in trees without excavated holes. These results suggest that symbiotic associations between acorn woodpeckers and fungi are highly diverse, with low specificity. Symbiotic associations between cavity-excavators and fungi are likely more common and widespread than previously thought.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-10-27

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

metagenomics; sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA775654

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA775654 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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