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Fungal Community Analysis of Californian Soils Cropped to Brassica species and Heterodera schachtii Females Derived from those Soils

dataset
posted on 2024-11-23, 22:05 authored by University of California at Riverside
The goal of this study was to determine whether indigenous populations of the nematophagous fungus, Hyalorbilia oviparasitica (formerly Dactylella oviparasitica) and related fungi, were associated with suppression of the sugarbeet cyst nematode (Heterodera schachtii) in Californian soils previously cropped to Brassica species. Experiments to determine the amount of biological H. schachtii suppressiveness in these soils were performed by planting a H. schachtii host crop in autoclaved and unautoclaved portions of each soil, infesting them with H. schachtii, and then counting the number of H. schachtii females after two nematode generations. The amount of suppressiveness was calculated by dividing the number of H. schachtii females per gram of fresh cabbage roots from the autoclaved soils by those from the unautoclaved soils. The relationship between the amounts of H. schachtii suppressiveness and the population densities of H. oviparasitica and related fungi was examined in two ways. These analyses showed that the four soils with the highest amounts of nematode suppressiveness also had the highest population densities of these fungi, and that there was a strong positive correlation between the levels of H. schachtii suppressiveness and these fungi across all of the tested soils.

Funding

USDA-NIFA: 2018-67014-28066

USDA CSREES: 2007-35302-18164

UC ANR: 17-5026

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-06-09

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA638436

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA638436 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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