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Fructan biosynthesis gene expression upon cold acclimation in orchardgrass (Dactylis glomerata L.)

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posted on 2024-09-29, 07:19 authored by USDA ARS, Novogene
Because of the relationship between winter hardiness and fructan accumulation, we measured the fructan content of five orchardgrass germplasm sources considered to differ in winter hardiness. We hypothesized that fructan accumulation upon cold acclimation would increase and cause orchardgrass plants to become more freezing tolerant, and that fructan biosynthesis gene transcripts would be induced upon cold acclimation while fructan degradation gene transcripts would be reduced. Within the context of recent genomic resources, we identified glycoside hydrolase 32 (GH32) genes with likely invertase, fructosyltransferase, and exohydrolase gene functions based on homologies to Triticeae and L. perenne characterized genes. We found that orchardgrass does indeed contain fewer fructosyltransferases than Triticeae or L. perenne, but many unspecified genes with homology to fructan exohydrolases (FEH) and cell wall invertase (CWI) genes.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-09-06

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA1157851

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1157851 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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