Frankliniella occidentalis genome annotations v0.5.3
This dataset presents the Frankliniella occidentalis gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Frankliniella occidentalis genome assembly 1.0. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use.
Resources in this dataset:
Resource Title: Frankliniella occidentalis genome annotations v0.5.3 for genome assembly v1.0.
File Name: fraocc_BCM_version_0.5.3.tar.gz
Resource Description: The attached tar.gz archive (FOCC_BCM_version_0.5.3.tar.gz) contains the following files:
FOCC.CDS.fna. CDS sequences of Frankliniella occidentalis genome annotations v0.5.3.
FOCC.faa. Amino acid sequences of Frankliniella occidentalis genome annotations v0.5.3.
FOCC.fna. cDNA sequences of Frankliniella occidentalis genome annotations v0.5.3.
FOCC.Models.gff3. Gff3 of all gene predictions of Frankliniella occidentalis genome annotations v0.5.3.
FOCC.Analysis.gff3 Gff3 of all evidence contributing to Frankliniella occidentalis genome annotations v0.5.3.
Funding
National Human Genome Research Institute: U54 HG003273
History
Data contact name
Rotenberg, DorithData contact email
drotenb@ncsu.eduPublisher
Ag Data CommonsTheme
- Not specified
ISO Topic Category
- biota
Ag Data Commons Group
- Insects - i5K
National Agricultural Library Thesaurus terms
genome assembly; nucleotide sequences; sequence analysis; Frankliniella occidentalis; genesPending citation
- No
Public Access Level
- Public