Evolutionary and epidemiological insights from historical and modern genomes of Xanthomonas oryzae pv. oryzicola, the causal agent of bacterial leaf streak of rice

dataset

posted on 2024-11-23, 21:29 authored by Cornell University

In this study, we reconstructed the genome of an historical Xoc strain from a rice BLS-infected herbarium specimen sampled in Madagascar in 1931, 50 years before the first description of the disease, and sequenced 9 new modern strains including 5 from Madagascar and East Africa.

Funding

USDA: 2020-67013-31188

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-03-26

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

Public Access Level

Public

Accession Number

PRJNA1092245

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It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1092245 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

genome sequencing eSequence

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