Evaluation of Pseudomonas putida KT2440 gene expression in the Arabidopsis thaliana rhizosphere

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posted on 2024-09-29, 05:02 authored by Dr. Daniel A. Kluepfel, Crops Pathology and Genetics Research Unit, USDA-Agricultural Research Service

Gene expression patterns of the plant colonizing bacterium,Pseudomonas putida KT2440 were evaluated as a function of growth in the Arabidopsis thaliana rhizosphere. Gene expression in rhizosphere grown P. putida cells was compared to gene expression in non-rhizosphere grown cells. Keywords: Gene expression Overall design: The experiment contained three biological replicates, two conditions (plus plant, minus plant), and two time points (48 and 120 hours).

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2008-01-11

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

Public Access Level

Public

Accession Number

PRJNA102487

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It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA102487 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Pseudomonas putida KT2440 eBacteria

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