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Evaluating the assembly of diverse bacterial genomes using MinION™ long-read sequencing technology

dataset

posted on 2024-06-11, 05:53 authored by University of Connecticut Graf Lab

Nine different bacterial strains belonging to three genera, Aeromonas, Flavobacterium and Pseudocardia were sequenced using the MinION and MiSeq. Different assembly pipelines were evaluated.

Funding

National Science Foundation, 1656475

U.S. Department of Agriculture, 58-1930-4-002

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-06-21

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA477342

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA477342 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

genome sequencing and assembly genome sequencing

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