Eurytemora affinis complex (Atlantic clade) genome annotations v0.5.3
This dataset presents the Eurytemora affinis complex (Atlantic clade) gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Eurytemora affinis complex (Atlantic clade) genome assembly 1.0. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use.
Resources in this dataset:
Resource Title: Eurytemora affinis complex (Atlantic clade) genome annotations v0.5.3.
File Name: euraff_BCM_version_0.5.3.tar.gz
Resource Description: The attached tar.gz archive (EAFF_BCM_version_0.5.3.tar.gz) contains the following files:
EAFF.CDS.fna. CDS sequences of Eurytemora affinis complex (Atlantic clade) genome annotations v0.5.3.
EAFF.faa. Amino acid sequences of Eurytemora affinis complex (Atlantic clade) genome annotations v0.5.3.
EAFF.fna. cDNA sequences of Eurytemora affinis complex (Atlantic clade) genome annotations v0.5.3.
EAFF.Models.gff3. Gff3 of all gene predictions of Eurytemora affinis complex (Atlantic clade) genome annotations v0.5.3.
EAFF.Analysis.gff3 Gff3 of all evidence contributing to Eurytemora affinis complex (Atlantic clade) genome annotations v0.5.3.
Funding
National Human Genome Research Institute: U54 HG003273
History
Data contact name
Lee, CarolData contact email
carollee@wisc.eduPublisher
Ag Data CommonsTemporal Extent Start Date
2016-01-01Temporal Extent End Date
2017-12-31Theme
- Not specified
Geographic Coverage
{"type":"FeatureCollection","features":[{"geometry":{"type":"Point","coordinates":[-69.21,48.01]},"type":"Feature","properties":{}}]}Geographic location - description
Canada: Baie de L'Isle Verte, St. Lawrence estuary (salt marsh), QuebecISO Topic Category
- biota
Ag Data Commons Group
- Insects - i5K
National Agricultural Library Thesaurus terms
genomics; genes; genome assembly; Eurytemora affinisPending citation
- No
Public Access Level
- Public
