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Escherichia coli strain:ATCC 700414 Genome sequencing and assembly

dataset
posted on 2024-11-23, 21:50 authored by USDA-Agricultural Research Service-Eastern Regional Research Center
Escherichia coli strain ATCC 700414 is a naturally occurring, Gram negative, enteric bacterium that was isolated from a woman with cystitis (bladder infection). This strain possesses virulence factors consistent with Uropathogenic Escherichia coli (UPEC). Urinary tract infections could be considered a form of foodborne illness, as meat and poultry are routinely contaminated with UPEC. Urinary tract infections can occur after consumption of contaminated food, colonization of the distal colon by UPEC, followed by accidental transfer of contaminated feces from the anus to the urethra. In this study, we fully sequenced and annotated Escherichia coli ATCC 700414 to further elucidate the genome and to facilitate research on the detection and control of UPEC in foods.

Funding

USDA-ARS: 8072-42000-078-00-D

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2017-07-07

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA393428

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA393428 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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