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Escherichia coli O55:H7 str. RM12579 genome sequencing

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posted on 2024-06-11, 07:14 authored by USDA/ARS

Enteropathogenic Escherichia coli (EPEC) is a leading cause of infant mortality and morbidity in developing countries. In spite of this, only two EPEC genomes have been fully sequenced: the typical, model EPEC strain E2348/69 (O127:H6), and the contemporary, atypical EPEC strain CB9615 (O55:H7, Germany, 2003). This latter serotype has been established as a recent precursor to the virulent, enterohemorrhagic E. coli serotype O157:H7. We chose to sequence strain RM12579 (California, 1974) due to its proximity in time and space to the first O157:H7 isolated in the US, a California isolate from 1975.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2012-01-31

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

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Public Access Level

Public

Accession Number

PRJNA68245

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA68245 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Escherichia coli O55:H7 str. RM12579 RM12579 eBacteria genome sequencing

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