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Endophytic Microbiome of Vitis vinifera

dataset
posted on 2024-11-23, 22:03 authored by University of California, Riverside
The aim of this work was to determine the origin of the microbial endophytes inhabiting grapevine. We focused on a single commercial vineyard in California over a two-year period and used an amplicon metagenomics approach to profile the bacterial (16S -V4) and fungal (ITS) communities of the microbiome across a continuum of six grapevine compartments; bulk soil, rhizosphere, root, cordon, cane and sap.

Funding

USDA: 233883

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-03-04

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA610418

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA610418 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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