posted on 2024-02-16, 20:35authored byStephen Richards, Jiaxin Qu, Huaiyang Jiang, Matthew N. Batterton, Kerstin P. Blankenburg, Sai Gubbala, Yi Han, Joy C. Jayaseelan, Divya Kalra, Christie L. Kovar, Sandra L. Lee, Mingmei Li, Tittu Mathew, Mala Munidasa, Fiona Ongeri, Lora Perales, Ling-Ling Pu, Nehad Saada, Rebecca L. Thornton, Crystal B. Warner, Yuan-Qing Wu, Xiaoyan Zou, Steven E. Scherer, Kim C. Worley, Donna M. Muzny, Richard A. Gibbs
<p>This research on Drosophila takahashii genomics is part of the Drosophila modENCODE project.
The Baylor College of Medicine is studying the comparative genomics of eight species of Drosophila, including biarmipes, bipectinata, elegans, eugracillis, ficusphila, kikkawai, rhopaloa, and takahashii. The genome assembly presented here is the pre-submission version of Dtak_2.0, which is archived at the National Center for Biotechnology as GCA_000224235.2.</p> <div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Drosophila takahashii genome assembly Dtak02082011 fasta, agp and qual files .</p> <p>File Name: BCM_Dtak02082011.tar.gz</p><p>Resource Description: The attached tar.gz archive (BCM_Dtak02082011.tar.gz) contains the following files:
Dtak02082011-contigs.fa. This file contains the sequence information of the contigs of the Drosophila takahashii Dtak02082011 genome assembly.
Dtak02082011-genome.fa. This file contains the sequence information of the scaffolds of the Drosophila takahashii Dtak02082011 genome assembly.
Dtak02082011-genome.agp. This file contains information linking the contigs and scaffolds for the Drosophila takahashii Dtak02082011 genome assembly. A description of the agp format is available here: <a href="https://www.ncbi.nlm.nih.gov/assembly/agp/AGP_Specification/" target="_blank">https://www.ncbi.nlm.nih.gov/assembly/agp/AGP_Specification/</a>
Dtak02082011-genome.fa.qual. This file contains quality scores for the Drosophila takahashii Dtak02082011 genome assembly.
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