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Draft Genomic Sequencing Of Potential Extraintestinal Pathogenic Escherichia coli FEX675 Isolated from Retail Chicken Meat

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posted on 2024-09-29, 05:45 authored by United States Department of Agriculture
Extraintestinal Pathogenic Escherichia coli are frequent contaminants in retail poultry meat. They are associated with ulcerative colitis, sepsis, and urinary tract infections. However, most Extraintestinal pathogenic E.coli (ExPEC) isolates which have published genomic sequences are clinical isolates, not food isolates. In this study we have determined the incidence and prevalence of ExPEC from the retail chicken meat products and are characterizing them using whole genome sequencing.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-02-16

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA433495

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA433495 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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