Ag Data Commons
Browse

Double-stranded RNA binding protein, Staufen, is required for the initiation of RNAi in coleopteran insects

dataset
posted on 2024-11-23, 21:54 authored by University of Kentucky
RNA interference (RNAi) is being used to develop methods to control pests and disease vectors. RNAi is robust and systemic in coleopteran insects but is quite variable in other insects. The determinants of efficient RNAi in coleopterans, as well as its potential mechanisms of resistance, are not known. RNAi screen identified a double-stranded RNA binding protein (StaufenC) as a major player in RNAi. StaufenC is homologs have been identified in only coleopteran insects. Experiments in two coleopteran insects, Leptinotarsa decemlineata and Tribolium castaneum showed the requirement of StaufenC for RNAi especially for processing of dsRNA to siRNA. RNAi resistant cells selected by exposing Lepd-SL1 to the inhibitor of apoptosis 1 dsRNA for multiple generations showed lower levels of StaufenC expression when compared to its expression in susceptible cells. These studies showed that coleopteran specific StaufenC is required for RNAi and is a potential target for RNAi resistance. The data included in this paper will help to improve RNAi in non-coleopteran insects and manage RNAi resistance in coleopteran insects.

Funding

USDA-HATCH: 2351177000

NIH: 1R21AI131427-01

NSF: IIP-1338775

NIH: GM070559-12

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-06-20

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA477238

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA477238 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC