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Development of race specific SSRs in Sorghum bicolor

dataset
posted on 2024-06-11, 06:19 authored by University of Nevada, Reno
The goal of this project was to develop SSRs specific to each race in Sorghum bicolor including the guinea working group margaritiferum. SSRs were identified in silico from previously published whole genome resequencing data. The data presented here is the validation of the SSR location in 53 sorghum individuals through targeted paired end 150 base pair Illumina sequencing. Sequencing was performed on an Illumina NextSeq 550. Each sample name contains the PI number of the sorghum accession used for the sequencing.

Funding

National Institute of Food and Agriculture, 2019-67014-29174

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-03-06

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA610844

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA610844 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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    Keywords

    raw sequence reads

    Licence

    Copyright Undetermined

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