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Data from: Two new species of Plasmopara affecting wild grapes in the United States

dataset
posted on 2023-12-18, 19:43 authored by Catalina Salgado-Salazar, Marco Thines
<p>Sequence alignments for cox2 and nc LSU rDNA datasets, as well as a reduced cox2 dataset used to determine the variable molecular characters that help to distinguish between the two new <em>Plasmopara</em> species described. The earliest specimen studied was collected in 1884, the most recent in 2021. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Cox2 dataset, aligned.</p> <p>File Name: Salgado_Salazar_COX2_dataset_Plasmoparaspnov.fasta</p></li><br><li><p>Resource Title: Cox2 dataset for barcoding, alignment.</p> <p>File Name: Salgado-Salazar_COX2_Plasmoparaspnov_barcodes.fasta</p></li><br><li><p>Resource Title: rDNA LSU dataset, alignment.</p> <p>File Name: Salgado-Salazar_LSU_dataset_Plasmoparaspnov.fasta</p></li></ul><p></p>

Funding

USDA-ARS: 8042-22000-298-00-D

History

Data contact name

Salgado-Salazar, Catalina

Data contact email

catalina.salgado@usda.gov

Publisher

Ag Data Commons

Intended use

Sequence alignments for cox2 and nc LSU rDNA datasets, as well as a reduced cox2 dataset used to determine the variable molecular characters that help distinguishing between the two new species described.

Temporal Extent Start Date

1884-01-01

Temporal Extent End Date

2021-10-01

Theme

  • Not specified

Geographic Coverage

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ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

new species; Plasmopara; grapes; United States; sequence alignment; ribosomal DNA; data collection; downy mildew; Vitaceae; fungal diseases of plants; taxonomy

OMB Bureau Code

  • 005:18 - Agricultural Research Service

OMB Program Code

  • 005:040 - National Research

ARS National Program Number

  • 303

Primary article PubAg Handle

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Salgado-Salazar, Catalina; Thines, Marco (2022). Data from: Two new species of Plasmopara affecting wild grapes in the United States. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1526426