Data from: Global distribution of mating types shows limited opportunities for mating across populations of fungi causing boxwood blight disease
Boxwood blight is a disease threat to natural and managed landscapes worldwide. To determine mating potential of the fungi responsible for the disease, Calonectria pseudonaviculata and C. henricotiae, we characterized their mating-type (MAT) loci. Genomes of C. henricotiae, C. pseudonaviculata and two other Calonectria species (C. leucothoes, C. naviculata) were sequenced and used to design PCR tests for mating-type from 268 isolates collected from four continents. All four Calonectria species have a MAT locus that is structurally consistent with the organization found in heterothallic ascomycetes, with just one idiomorph per individual isolate. Mating type was subdivided by species: all C. henricotiae isolates possessed the MAT1-1 idiomorph, whereas all C. pseudonaviculata isolates possessed the MAT1-2 idiomorph. To determine the potential for divergence at the MAT1 locus to present a barrier to interspecific hybridization, evolutionary analysis was conducted. Phylogenomic estimates showed that C. henricotiae and C. pseudonaviculata diverged approximately 2.1 Mya. However, syntenic comparisons, phylogenetic analyses, and estimates of nucleotide divergence across the MAT1 locus and proximal genes identified minimal divergence in this region of the genome. These results show that in North America and parts of Europe, where only C. pseudonaviculata resides, mating is constrained by the absence of MAT1-1. In regions of Europe where C. henricotiae and C. pseudonaviculata currently share the same host and geographic range, it remains to be determined whether or not these two recently diverged species are able to overcome species barriers to mate.
The four primary Calonectria genome assemblies generated as part of this study using Illumina sequencing technology are available through NCBI GenBank or through Ag Data Commons at https://doi.org/10.15482/USDA.ADC/1410184.
Resources in this dataset:
Resource Title: Website pointer to Global distribution of mating types shows limited opportunities for mating across populations of fungi causing boxwood blight disease.
File Name: Web Page, url: https://doi.org/10.1016/j.fgb.2019.103246
Funding
USDA-APHIS: Farm Bill Sections 10,021 and 10,007 Programs
USDA-ARS: 8042-22000-298
USDA-ARS: Floriculture and Nursery Research Initiative
Agentschap voor Innovatie door Wetenschap en Technologie: 080519
Oak Ridge Institute for Science and Education
U.S. Department of Energy: DE-AC05-06OR23100
History
Data contact name
Crouch, Jo AnneData contact email
joanne.crouch@ars.usda.govPublisher
Fungal Genetics and BiologyTemporal Extent Start Date
1999-01-01Temporal Extent End Date
2014-12-31Theme
- Not specified
Geographic Coverage
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Europe; Asia; North America; New Zealand; Slovenia; Belgium; Germany; Netherlands; United Kingdom; France; Delaware; Iran; Switzerland; Croatia; Connecticut; Spain; Italy; Rep. Georgia; Maryland; North Carolina; New Jersey; New York; Oregon; Ohio; TurkeyISO Topic Category
- biota
- environment
- farming
National Agricultural Library Thesaurus terms
Buxus sempervirens; blight; landscapes; fungi; Calonectria; loci; polymerase chain reaction; Ascomycota; interspecific hybridization; phylogeny; genes; North America; EuropeARS National Program Number
- 303
Primary article PubAg Handle
Pending citation
- No
Public Access Level
- Public