Data from: Genome resources for Thelonectria rubi, the causal agent of Nectria canker of caneberries
Thelonectria rubi is the causal agent of Nectria canker of Rubus spp. Here, we report a high-quality draft genome sequence for this pathogen, which also represents the first genome sequence for a Thelonectria species. The genome assembly was 44.6 Mb in size, assembled into 669 scaffolds and consisting of 12,973 predicted protein-coding genes. The availability of genome data for T. rubi provides a critical additional resource for an important plant pathogen and will be useful for fungal biology, comparative genomic, taxonomic and population studies of this and related species.
Whole-genome gene predictions and raw sequencing reads of Thelonectria rubi isolate CBS 177.27 are presented.
Resources in this dataset:
Resource Title: Augustus gene predictions.
File Name: Trubiaugustus.fa.zip
Resource Title: Illumina sequencing reads with quality scores.
File Name: T.rubiCBS17727_illuminareads.R1.1.fastq.zip
Funding
USDA-ARS: 8042-22000-298-00-D
Oak Ridge Institute for Science and Education
U.S. Department of Energy: DE-AC05-06OR23100
History
Data contact name
Salgado-Salazar, CatalinaData contact email
catalina.salgado@usda.govPublisher
Ag Data CommonsIntended use
for its use in comparative genomicsTheme
- Not specified
ISO Topic Category
- biota
National Agricultural Library Thesaurus terms
Nectria; Rubus; nucleotide sequences; genome assembly; genes; plant pathogens; mycology; genomicsOMB Bureau Code
- 005:00 - Department of Agriculture
OMB Program Code
- 005:040 - National Research
ARS National Program Number
- 301
- 303
Primary article PubAg Handle
Pending citation
- No
Public Access Level
- Public