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Data from: Genetic diversity and classification of Colletotrichum sublineola pathotypes using a standard set of sorghum differentials

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posted on 2024-06-14, 17:39 authored by LOUIS PROMLOUIS PROM, Ezekiel Ahn, Ramasamy Perumal, Hugo Cuevas, William Rooney, Thomas Isakeit, Clint Magill

A total of 30 isolates of Colletotrichum sublineola, causal agent of sorghum anthracnose were collected from Georgia, North Carolina, Puerto Rico, and Texas. Data for their virulence patterns on 18 sorghum differentials, RTx2536, SC748-5, Martin (BTx398), TAM428, BTx430, Brandes, SC112-14, Theis, BTx378, SC326-6, SC283, BTx623, SC328C, SC414-12E, PI570841, PI570726, PI569979, and IS18760 were collected from greenhouse trials in College Station, Texas by Louis K. Prom, Ezekiel J. S. Ahn, Ramasamy Perumal, Hugo E. Cuevas, William L. Rooney, Thomas S. Isakeit, and Clint W. Magill between 2014 and 2018. As described by Prom et al. 2012 and 2024, plants were assessed for anthracnose infection twice, 30 days post-inoculation and a week later using disease rating scale 1-5, where 1 = no symptoms or chlorotic flecks on leaves; 2 = hypersensitive reaction (reddening or red spots) on inoculated leaves but no acervuli formation; 3 = lesions on inoculated and bottom leaves with acervuli in the center; 4 = necrotic lesions with acervuli observed on inoculated and bottom leaves with infection spreading to middle leaves, and not yet on the flag leaves; and 5 = most leaves dead due to infection with infection on the flag leaf containing abundant acervuli. The symptom types were then categorized into two reaction classes, resistant = rating 1 or 2; and susceptible = rating 3, 4, or 5. As noted in the dataset, R = resistant response and S = susceptible response.


Funding

USDA-ARS: 3091-22000-040-00-D

History

Data contact name

Prom, Louis K

Data contact email

Louis.prom@usda.gov

Publisher

Ag Data Commons

Intended use

Delimiting isolates of Colletotrichum sublineola, causal agent of sorghum anthracnose using a standard set of differentials.

Temporal Extent Start Date

2014-03-15

Temporal Extent End Date

2018-10-08

Theme

  • Not specified

Geographic Coverage

{"type":"FeatureCollection","features":[{"geometry":{"type":"Point","coordinates":[-82.9071,32.1574]},"type":"Feature","properties":{}},{"geometry":{"type":"Point","coordinates":[-79.0193,35.7596]},"type":"Feature","properties":{}},{"geometry":{"type":"Point","coordinates":[-66.5901,18.2208]},"type":"Feature","properties":{}},{"geometry":{"type":"Point","coordinates":[-99.9018,31.9686]},"type":"Feature","properties":{}}]}

Geographic location - description

Colletotrichum sublineola isolates were collected from Georgia, North Carolina, and Texas, USA, and the US commonwealth of Puerto Rico. 32.1574 degrees N, 82.9071 degrees W 35.7596 degrees N, 79.0193 degrees W 18.2208 degrees N, 66.5901 degrees W 31.9686 degrees N, 99.9018 degrees W

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

anthracnose; genetic variation; pathotypes; classification; virulence; leaves; inoculation methods; greenhouse experimentation; lesions (plant); plant disease resistance; disease susceptibility; acervuli (fungi); Colletotrichum sublineola; Sorghum (Poaceae); Georgia; North Carolina; Puerto Rico; Texas

OMB Bureau Code

  • 005:18 - Agricultural Research Service

OMB Program Code

  • 005:040 - National Research

ARS National Program Number

  • 303

ARIS Log Number

410121

Pending citation

  • No

Public Access Level

  • Public