Data from: Draft genome sequence of Xylaria sp., the causal agent of taproot decline of soybean in the southern United States
The draft genome of Xylaria sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S., is presented here. The genome assembly was 56.7 Mb in size with an L50 of 246. A total of 10,880 putative protein-encoding genes were predicted, including 647 genes encoding carbohydrate-active enzymes and 1053 genes encoding secreted proteins. This is the first draft genome of a plant-pathogenic Xylaria sp. associated with soybean. The draft genome of Xylaria sp. isolate MSU_SB201401 will provide an important resource for future experiments to determine the molecular basis of pathogenesis. The whole genome shotgun project of Xylaria sp. isolate MSU_SB201401 has been deposited at DDBJ/ENA/GenBank under the accession number NPFG00000000; the version described in this paper is version NPFG01000000.
Resources in this dataset:
Resource Title: Draft genome sequence of Xylaria sp., the causal agent of taproot decline of soybean in the southern United States.
File Name: Web Page, url: https://www.sciencedirect.com/science/article/pii/S2352340917307552
Data in Brief presenting draft genome assembly and gene annotation of Xylaria sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S.
Funding
USDA-NIFA: Hatch project 1008895
USDA-NIFA: Hatch project LAB94338
History
Data contact name
Bluhm, Burton H.Data contact email
bbluhm@uark.eduPublisher
Data in BriefIntended use
This draft genome will accelerate functional genomics research and help to understand the molecular basis of pathogenicity.Theme
- Not specified
Geographic Coverage
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Southeastern United States; LouisianaISO Topic Category
- biota
- farming
National Agricultural Library Thesaurus terms
Xylaria; soybeans; genome assembly; genes; enzymes; protein secretion; pathogenesis; nucleotide sequences; Southeastern United States; plant pathogens; plant pathogenic fungi; root diseases; root rot; mycology; plant pathology; Louisiana; Biological SciencesPrimary article PubAg Handle
Pending citation
- No
Public Access Level
- Public