Data from: Control of chrysanthemum flowering through integration with an aging pathway
Age, as a threshold of floral competence acquisition, prevents precocious flowering when there is insufficient biomass, and ensures flowering independent of environmental conditions; however, the underlying regulatory mechanisms are largely unknown. In this study, silencing the expression of a nuclear factor gene, CmNF-YB8, from the short day plant chrysanthemum (Chrysanthemum morifolium), results in precocious transition from juvenile to adult, as well as early flowering, regardless of day length conditions. The expression of SQUAMOSA PROMOTER BINDING-LIKE (SPL) family members, SPL3, SPL5, and SPL9, is upregulated in CmNF-YB8-RNAi plants, while expression of the microRNA, cmo-MIR156, is downregulated. In addition, CmNF-YB8 is shown to bind to the promoter of the cmo-MIR156 gene. Ectopic expression of cmo-miR156, using a virus-based microRNA expression system, restores the early flowering phenotype caused by CmNF-YB8 silencing. These results show that CmNF-YB8 influences flowering time through directly regulating the expression of cmo-MIR156 in the aging pathway.
RNA-seq data associated with this study has been deposited in NCBI SRA database under accession code PRJNA393366.
Resources in this dataset:
Resource Title: Supplementary Data 1 - Differentially transcribed genes in CmNF-YB8-RNAi plants compared with wild type chrysanthemum .
File Name: Web Page, url: https://static-content.springer.com/esm/art:10.1038/s41467-017-00812-0/MediaObjects/41467_2017_812_MOESM2_ESM.xlsx
Provides Accession, Annotation, and Fold Change (Excel download)
Funding
National Natural Science Foundation of China: 31372094
National Natural Science Foundation of China: 31572157
National Natural Science Foundation of China: 31171990
History
Data contact name
Hong, BoData contact email
hongbo1023@cau.edu.cnPublisher
NCBI SRA databaseTemporal Extent Start Date
2017-10-10Theme
- Not specified
Geographic Coverage
{"type":"FeatureCollection","features":[{"geometry":{"type":"Point","coordinates":[116.353,40.0042]},"type":"Feature","properties":{}}]}ISO Topic Category
- biota
National Agricultural Library Thesaurus terms
biomass; genes; Chrysanthemum morifolium; juveniles; adults; photoperiod; microRNA; phenotype; flowering date; sequence analysis; databases; plant age; harvest date; gene expression regulationPending citation
- No
Public Access Level
- Public