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Data from: Comparative Analysis Reveals Genomic Characteristics in R-genes for HLB Resistance in Wild Australian Limes

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posted on 2024-12-12, 18:09 authored by JIANYANG LIUJIANYANG LIU, Khushwant Singh, Christopher Gottschalk, Michael Do, Margaret Staton, Manjunath L. Keremane, Robert Krueger, Chandrika Ramadugu, Chris Dardick

Huanglongbing (HLB) is a devastating citrus disease that threatens the citrus industry globally. HLB is associated with the bacteria Candidatus Liberibacter asiaticus (CLas) and lacks tools for economically viable disease management. Previous field evaluation of citrus germplasm identified Australian wild limes as naturally tolerant/resistant to HLB. The resistance was hypothesized to be conferred by resistance genes (R-genes), the products of which mediate pathogen-specific defense responses. To gain insight into the mechanisms underlying HLB-resistance on the genomic level, we annotated and characterized the R-genes in the genomes of five citrus species with different HLB-resistance levels. Among these species, three were wild Australian limes rated as HLB-resistant (Citrus glauca) and HLB-tolerant (C. australasica and C. inodora), and two were cultivated species (C. clementina and C. sinensis) both rated as susceptible.

Funding

Development of huanglongbing resistant/tolerant citrus through genomic approaches.

National Institute of Food and Agriculture

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CAP: Evaluation of promising, HLB-resistant/tolerant citrus scion hybrids generated by breeding

National Institute of Food and Agriculture

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History

Data contact name

Liu, Jianyang

Data contact email

jianyang.liu@usda.gov

Publisher

Ag Data Commons

Intended use

Research only

Temporal Extent Start Date

2023-03-01

Temporal Extent End Date

2025-11-30

Frequency

  • continual

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

greening disease; fruit diseases; industry; bacteria; Candidatus Liberibacter asiaticus; economic sustainability; disease control; germplasm; limes; resistance genes; genomics; Eremocitrus glauca; Microcitrus australasica; Citrus clementina; Citrus sinensis

Pending citation

  • No

Public Access Level

  • Public

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