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Data from: Comparative Analysis Reveals Genomic Characteristics in <i>R-genes</i> for HLB Resistance in Wild Australian Limes

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posted on 2024-12-12, 18:09 authored by JIANYANG LIUJIANYANG LIU, Khushwant Singh, Christopher Gottschalk, Michael Do, Margaret Staton, Manjunath L. Keremane, Robert Krueger, Chandrika Ramadugu, Chris Dardick
<p dir="ltr">Huanglongbing (HLB) is a devastating citrus disease that threatens the citrus industry globally. HLB is associated with the bacteria <i>Candidatus </i>Liberibacter asiaticus (<i>C</i>Las) and lacks tools for economically viable disease management. Previous field evaluation of citrus germplasm identified Australian wild limes as naturally tolerant/resistant to HLB. The resistance was hypothesized to be conferred by resistance genes (<i>R-genes</i>), the products of which mediate pathogen-specific defense responses. To gain insight into the mechanisms underlying HLB-resistance on the genomic level, we annotated and characterized the <i>R-genes</i> in the genomes of five citrus species with different HLB-resistance levels. Among these species, three were wild Australian limes rated as HLB-resistant (<i>Citrus glauca</i>) and HLB-tolerant (<i>C. australasica </i>and<i> C. inodora</i>), and two were cultivated species (<i>C. clementina</i> and <i>C. sinensis</i>) both rated as susceptible. </p>

Funding

Development of huanglongbing resistant/tolerant citrus through genomic approaches.

National Institute of Food and Agriculture

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CAP: Evaluation of promising, HLB-resistant/tolerant citrus scion hybrids generated by breeding

National Institute of Food and Agriculture

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History

Data contact name

Liu, Jianyang

Data contact email

jianyang.liu@usda.gov

Publisher

Ag Data Commons

Intended use

Research only

Temporal Extent Start Date

2023-03-01

Temporal Extent End Date

2025-11-30

Frequency

  • continual

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

greening disease; fruit diseases; industry; bacteria; Candidatus Liberibacter asiaticus; economic sustainability; disease control; germplasm; limes; resistance genes; genomics; Eremocitrus glauca; Microcitrus australasica; Citrus clementina; Citrus sinensis

Pending citation

  • No

Public Access Level

  • Public

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